{"id":144147,"date":"2024-11-01T08:49:28","date_gmt":"2024-11-01T00:49:28","guid":{"rendered":"https:\/\/server.hk\/cnblog\/144147\/"},"modified":"2024-11-01T08:49:29","modified_gmt":"2024-11-01T00:49:29","slug":"uniprot-%e6%95%b8%e6%93%9a%e5%ba%ab%e5%a6%82%e4%bd%95%e4%bd%bf%e7%94%a8%ef%bc%9f-uniprot-%e6%95%b8%e6%93%9a%e5%ba%ab%e4%bd%bf%e7%94%a8","status":"publish","type":"post","link":"https:\/\/server.hk\/cnblog\/144147\/","title":{"rendered":"Uniprot \u6578\u64da\u5eab\u5982\u4f55\u4f7f\u7528\uff1f (uniprot \u6578\u64da\u5eab\u4f7f\u7528)"},"content":{"rendered":"<h1 id=\"uniprot-%e6%95%b8%e6%93%9a%e5%ba%ab%e5%a6%82%e4%bd%95%e4%bd%bf%e7%94%a8%ef%bc%9f-TpmyTWbKhk\">Uniprot \u6578\u64da\u5eab\u5982\u4f55\u4f7f\u7528\uff1f<\/h1>\n<p>Uniprot\uff08Universal Protein Resource\uff09\u662f\u4e00\u500b\u5168\u9762\u7684\u86cb\u767d\u8cea\u5e8f\u5217\u548c\u529f\u80fd\u6578\u64da\u5eab\uff0c\u5ee3\u6cdb\u61c9\u7528\u65bc\u751f\u7269\u5b78\u548c\u751f\u7269\u4fe1\u606f\u5b78\u7814\u7a76\u3002\u5b83\u63d0\u4f9b\u4e86\u5927\u91cf\u7684\u86cb\u767d\u8cea\u4fe1\u606f\uff0c\u5305\u62ec\u5e8f\u5217\u3001\u529f\u80fd\u3001\u7d50\u69cb\u3001\u76f8\u4e92\u4f5c\u7528\u548c\u751f\u7269\u5b78\u904e\u7a0b\u7b49\u3002\u672c\u6587\u5c07\u4ecb\u7d39\u5982\u4f55\u6709\u6548\u5730\u4f7f\u7528 Uniprot \u6578\u64da\u5eab\uff0c\u5e6b\u52a9\u7814\u7a76\u4eba\u54e1\u548c\u5b78\u751f\u66f4\u597d\u5730\u5229\u7528\u9019\u4e00\u8cc7\u6e90\u3002<\/p>\n<h2 id=\"uniprot-%e6%95%b8%e6%93%9a%e5%ba%ab%e7%9a%84%e7%b5%90%e6%a7%8b-TpmyTWbKhk\">Uniprot \u6578\u64da\u5eab\u7684\u7d50\u69cb<\/h2>\n<p>Uniprot \u6578\u64da\u5eab\u4e3b\u8981\u7531\u4e09\u500b\u90e8\u5206\u7d44\u6210\uff1a<\/p>\n<ul>\n<li><strong>UniprotKB<\/strong>\uff1a\u5305\u542b\u7d93\u904e\u8a3b\u91cb\u7684\u86cb\u767d\u8cea\u5e8f\u5217\u6578\u64da\uff0c\u5206\u70ba\u5169\u500b\u90e8\u5206\uff1aSwiss-Prot\uff08\u7d93\u904e\u4eba\u5de5\u8a3b\u91cb\u7684\u9ad8\u8cea\u91cf\u6578\u64da\uff09\u548c TrEMBL\uff08\u81ea\u52d5\u8a3b\u91cb\u7684\u6578\u64da\uff09\u3002<\/li>\n<li><strong>Uniprot Archive<\/strong>\uff1a\u5b58\u5132\u904e\u53bb\u7684\u6578\u64da\u7248\u672c\uff0c\u4fbf\u65bc\u8ffd\u6eaf\u548c\u6bd4\u8f03\u3002<\/li>\n<li><strong>Uniprot Metagenomic and Environmental Data<\/strong>\uff1a\u63d0\u4f9b\u4f86\u81ea\u74b0\u5883\u6a23\u672c\u7684\u86cb\u767d\u8cea\u6578\u64da\u3002<\/li>\n<\/ul>\n<h2 id=\"%e5%a6%82%e4%bd%95%e8%a8%aa%e5%95%8f-uniprot-%e6%95%b8%e6%93%9a%e5%ba%ab-TpmyTWbKhk\">\u5982\u4f55\u8a2a\u554f Uniprot \u6578\u64da\u5eab<\/h2>\n<p>\u8a2a\u554f Uniprot \u6578\u64da\u5eab\u975e\u5e38\u7c21\u55ae\uff0c\u53ea\u9700\u524d\u5f80 <a href=\"https:\/\/www.uniprot.org\" rel=\"nofollow noopener\" target=\"_blank\">Uniprot \u5b98\u65b9\u7db2\u7ad9<\/a>\u3002\u5728\u9996\u9801\u4e0a\uff0c\u60a8\u53ef\u4ee5\u770b\u5230\u641c\u7d22\u6846\uff0c\u60a8\u53ef\u4ee5\u901a\u904e\u86cb\u767d\u8cea\u540d\u7a31\u3001\u57fa\u56e0\u540d\u7a31\u3001UniProt ID \u6216\u5176\u4ed6\u76f8\u95dc\u4fe1\u606f\u9032\u884c\u641c\u7d22\u3002<\/p>\n<h2 id=\"%e4%bd%bf%e7%94%a8-uniprot-%e6%95%b8%e6%93%9a%e5%ba%ab%e7%9a%84%e6%ad%a5%e9%a9%9f-TpmyTWbKhk\">\u4f7f\u7528 Uniprot \u6578\u64da\u5eab\u7684\u6b65\u9a5f<\/h2>\n<h3 id=\"1-%e6%90%9c%e7%b4%a2%e8%9b%8b%e7%99%bd%e8%b3%aa-TpmyTWbKhk\">1. \u641c\u7d22\u86cb\u767d\u8cea<\/h3>\n<p>\u5728\u641c\u7d22\u6846\u4e2d\u8f38\u5165\u60a8\u611f\u8208\u8da3\u7684\u86cb\u767d\u8cea\u540d\u7a31\u6216\u76f8\u95dc\u95dc\u9375\u8a5e\uff0c\u7136\u5f8c\u6309\u4e0b\u201c\u641c\u7d22\u201d\u6309\u9215\u3002\u7cfb\u7d71\u5c07\u986f\u793a\u8207\u60a8\u641c\u7d22\u689d\u4ef6\u5339\u914d\u7684\u86cb\u767d\u8cea\u5217\u8868\u3002<\/p>\n<h3 id=\"2-%e7%80%8f%e8%a6%bd%e8%9b%8b%e7%99%bd%e8%b3%aa%e4%bf%a1%e6%81%af-TpmyTWbKhk\">2. \u700f\u89bd\u86cb\u767d\u8cea\u4fe1\u606f<\/h3>\n<p>\u9ede\u64ca\u60a8\u611f\u8208\u8da3\u7684\u86cb\u767d\u8cea\u689d\u76ee\uff0c\u60a8\u5c07\u9032\u5165\u8a72\u86cb\u767d\u8cea\u7684\u8a73\u7d30\u9801\u9762\u3002\u9019\u88e1\u5305\u542b\u4e86\u8a72\u86cb\u767d\u8cea\u7684\u5e8f\u5217\u3001\u529f\u80fd\u3001\u7d50\u69cb\u3001\u76f8\u4e92\u4f5c\u7528\u3001\u57fa\u56e0\u4fe1\u606f\u7b49\u591a\u65b9\u9762\u7684\u8cc7\u6599\u3002<\/p>\n<h3 id=\"3-%e4%b8%8b%e8%bc%89%e6%95%b8%e6%93%9a-TpmyTWbKhk\">3. \u4e0b\u8f09\u6578\u64da<\/h3>\n<p>\u5728\u86cb\u767d\u8cea\u8a73\u7d30\u9801\u9762\u4e0a\uff0c\u60a8\u53ef\u4ee5\u9078\u64c7\u4e0b\u8f09\u8a72\u86cb\u767d\u8cea\u7684\u5e8f\u5217\u6216\u5176\u4ed6\u76f8\u95dc\u6578\u64da\u3002\u901a\u5e38\uff0c\u60a8\u53ef\u4ee5\u9078\u64c7\u591a\u7a2e\u683c\u5f0f\uff0c\u5982 FASTA\u3001CSV \u6216 XML \u683c\u5f0f\uff0c\u65b9\u4fbf\u5f8c\u7e8c\u7684\u5206\u6790\u548c\u4f7f\u7528\u3002<\/p>\n<h3 id=\"4-%e4%bd%bf%e7%94%a8-api-%e9%80%b2%e8%a1%8c%e8%87%aa%e5%8b%95%e5%8c%96%e6%9f%a5%e8%a9%a2-TpmyTWbKhk\">4. \u4f7f\u7528 API \u9032\u884c\u81ea\u52d5\u5316\u67e5\u8a62<\/h3>\n<p>Uniprot \u9084\u63d0\u4f9b\u4e86 API \u63a5\u53e3\uff0c\u65b9\u4fbf\u7528\u6236\u9032\u884c\u81ea\u52d5\u5316\u67e5\u8a62\u3002\u4ee5\u4e0b\u662f\u4e00\u500b\u4f7f\u7528 Python \u8a9e\u8a00\u8abf\u7528 Uniprot API \u7684\u7c21\u55ae\u793a\u4f8b\uff1a<\/p>\n<pre><code>import requests\n\ndef get_protein_info(uniprot_id):\n    url = f\"https:\/\/www.uniprot.org\/uniprot\/{uniprot_id}.txt\"\n    response = requests.get(url)\n    return response.text\n\nprotein_info = get_protein_info(\"P12345\")\nprint(protein_info)\n<\/code><\/pre>\n<h2 id=\"uniprot-%e6%95%b8%e6%93%9a%e5%ba%ab%e7%9a%84%e6%87%89%e7%94%a8-TpmyTWbKhk\">Uniprot \u6578\u64da\u5eab\u7684\u61c9\u7528<\/h2>\n<p>Uniprot \u6578\u64da\u5eab\u5728\u591a\u500b\u9818\u57df\u4e2d\u90fd\u6709\u5ee3\u6cdb\u7684\u61c9\u7528\uff0c\u5305\u62ec\uff1a<\/p>\n<ul>\n<li><strong>\u57fa\u56e0\u7d44\u5b78<\/strong>\uff1a\u7814\u7a76\u57fa\u56e0\u8207\u86cb\u767d\u8cea\u4e4b\u9593\u7684\u95dc\u4fc2\u3002<\/li>\n<li><strong>\u85e5\u7269\u958b\u767c<\/strong>\uff1a\u5c0b\u627e\u6f5b\u5728\u7684\u85e5\u7269\u9776\u9ede\u3002<\/li>\n<li><strong>\u7cfb\u7d71\u751f\u7269\u5b78<\/strong>\uff1a\u5206\u6790\u86cb\u767d\u8cea\u76f8\u4e92\u4f5c\u7528\u7db2\u7d61\u3002<\/li>\n<li><strong>\u9032\u5316\u751f\u7269\u5b78<\/strong>\uff1a\u7814\u7a76\u86cb\u767d\u8cea\u7684\u9032\u5316\u6b77\u7a0b\u3002<\/li>\n<\/ul>\n<h2 id=\"%e7%b8%bd%e7%b5%90-TpmyTWbKhk\">\u7e3d\u7d50<\/h2>\n<p>Uniprot \u6578\u64da\u5eab\u662f\u4e00\u500b\u5f37\u5927\u7684\u5de5\u5177\uff0c\u70ba\u7814\u7a76\u4eba\u54e1\u63d0\u4f9b\u4e86\u8c50\u5bcc\u7684\u86cb\u767d\u8cea\u4fe1\u606f\u3002\u901a\u904e\u6709\u6548\u5730\u4f7f\u7528 Uniprot\uff0c\u60a8\u53ef\u4ee5\u7372\u5f97\u95dc\u65bc\u86cb\u767d\u8cea\u7684\u8a73\u7d30\u8cc7\u6599\uff0c\u4e26\u5229\u7528\u9019\u4e9b\u4fe1\u606f\u63a8\u9032\u60a8\u7684\u7814\u7a76\u3002\u7121\u8ad6\u60a8\u662f\u5f9e\u4e8b\u57fa\u56e0\u7d44\u5b78\u3001\u85e5\u7269\u958b\u767c\u9084\u662f\u5176\u4ed6\u751f\u7269\u5b78\u7814\u7a76\uff0cUniprot \u90fd\u80fd\u70ba\u60a8\u63d0\u4f9b\u91cd\u8981\u7684\u652f\u6301\u3002\u5982\u679c\u60a8\u9700\u8981\u7a69\u5b9a\u7684 <a href=\"https:\/\/server.hk\">VPS<\/a> \u670d\u52d9\u4f86\u9032\u884c\u6578\u64da\u5206\u6790\u6216\u5b58\u5132\uff0c\u8acb\u8003\u616e\u6211\u5011\u7684\u89e3\u6c7a\u65b9\u6848\uff0c\u8b93\u60a8\u7684\u7814\u7a76\u66f4\u52a0\u9ad8\u6548\u3002<\/p>\n","protected":false},"excerpt":{"rendered":"<p>\u4e86\u89e3\u5982\u4f55\u4f7f\u7528Uniprot\u6578\u64da\u5eab\uff0c\u67e5\u8a62\u86cb\u767d\u8cea\u4fe1\u606f\u3001\u529f\u80fd\u3001\u7d50\u69cb\u53ca\u76f8\u95dc\u6587\u737b\uff0c\u52a9\u529b\u751f\u7269\u7814\u7a76\u8207\u6578\u64da\u5206\u6790\u3002<\/p>\n","protected":false},"author":0,"featured_media":0,"comment_status":"closed","ping_status":"","sticky":false,"template":"","format":"standard","meta":{"footnotes":""},"categories":[101],"tags":[],"class_list":["post-144147","post","type-post","status-publish","format-standard","hentry","category-database"],"_links":{"self":[{"href":"https:\/\/server.hk\/cnblog\/wp-json\/wp\/v2\/posts\/144147","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/server.hk\/cnblog\/wp-json\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/server.hk\/cnblog\/wp-json\/wp\/v2\/types\/post"}],"replies":[{"embeddable":true,"href":"https:\/\/server.hk\/cnblog\/wp-json\/wp\/v2\/comments?post=144147"}],"version-history":[{"count":1,"href":"https:\/\/server.hk\/cnblog\/wp-json\/wp\/v2\/posts\/144147\/revisions"}],"predecessor-version":[{"id":144148,"href":"https:\/\/server.hk\/cnblog\/wp-json\/wp\/v2\/posts\/144147\/revisions\/144148"}],"wp:attachment":[{"href":"https:\/\/server.hk\/cnblog\/wp-json\/wp\/v2\/media?parent=144147"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/server.hk\/cnblog\/wp-json\/wp\/v2\/categories?post=144147"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/server.hk\/cnblog\/wp-json\/wp\/v2\/tags?post=144147"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}